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data/perl-dependencies/gentoo.ini: sync with opensuse.ini

This file referred to a package that never existed (I've checked the historic repo.. not there either) called YAML-XS. Based on some blaming, I believe the intention was to depend on JSON-XS. YAML-PP can also be swapped for YAML-LibYAML to match other distros. URI was not specified, so add it.

Updated package list is based off of the list of packages in opensuse.ini.

I've also seen this mentioned on Discourse: https://discuss.kde.org/t/missing-packages-for-kdesrc-build/13978

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